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In v5.1 version, it is possible to skip the default specimen collection step and navigate to a configurable data entry step directly.
When collecting planned or unplanned samples, user is taken to the below default specimen collection page:
The fields in this page are limited and not configurable. If user does not need all fields on the default collection page, this page can be hidden and directly taken to configurable data entry page(nth step). This gives more flexibility to add the fields that are required and remove unwanted fields.
Steps to hide default specimen collection page:
Add the below line of code after the fieldGroups in the specimenCollection section:
<"showCollectionTree" : false>
Example: Below JSON code allows user to hide default specimen collection page and add required fields in the nth step like anatomic site, frozen event etc.
To add the JSON using the 'REST API Invoker Plugin' from OpenSpecimen, refer to https://openspecimen.atlassian.net/wiki/x/G4DgB.
| URL | http://<host>:<port>/openspecimen/rest/ng/collection-protocols/{id}/workflows |
| Method | PUT |
| Request | application/json |
| Example json | Along with the below code block, having dictionary section is mandatory which will include definition for all the fields used in this section.
{
"name": "specimenCollection",
"data": {
"fieldGroups": [
{
"title": "Anatomic Site",
"criteria": {
"rules": [
{
"field": "specimen.lineage",
"op": "==",
"value": "'New'"
}
]
},
"fields": [
{
"name": "specimen.label",
"baseField": "specimen.label",
"type": "span"
},
{
"name": "specimen.anatomicSite",
"baseField": "specimen.anatomicSite"
},
{
"name": "specimen.laterality",
"baseField": "specimen.laterality"
}
]
},
{
"title": "Spun Event for Blood Specimens",
"criteria": {
"op": "AND",
"rules": [
{
"field": "specimen.type",
"op": "==",
"value": "'Whole Blood'"
},
{
"field": "specimen.lineage",
"op": "==",
"value": "'New'"
}
]
},
"fields": [
{
"name": "specimen.label",
"baseField": "specimen.label",
"type": "span"
},
{
"name": "events.SpecimenSpunEvent.user",
"baseField": "specimen.events.SpecimenSpunEvent.user"
},
{
"name": "events.SpecimenSpunEvent.time",
"baseField": "specimen.events.SpecimenSpunEvent.time"
},
{
"name": "events.SpecimenSpunEvent.gForce",
"baseField": "specimen.events.SpecimenSpunEvent.gForce"
},
{
"name": "events.SpecimenSpunEvent.duration",
"baseField": "specimen.events.SpecimenSpunEvent.duration"
},
{
"name": "events.SpecimenSpunEvent.comments",
"baseField": "specimen.events.SpecimenSpunEvent.comments"
}
]
},
{
"title": "Events for Frozen Tissue",
"criteria": {
"op": "AND",
"rules": [
{
"field": "specimen.lineage",
"op": "==",
"value": "'New'"
},
{
"field": "specimen.type",
"op": "==",
"value": "'Frozen Tissue'"
}
]
},
"fields": [
{
"name": "specimen.label",
"baseField": "specimen.label",
"type": "span"
},
{
"name": "events.SpecimenCheckInCheckOutEvent.status",
"baseField": "specimen.events.SpecimenCheckInCheckOutEvent.status"
},
{
"name": "events.SpecimenCheckInCheckOutEvent.user",
"baseField": "specimen.events.SpecimenCheckInCheckOutEvent.user"
},
{
"name": "events.SpecimenCheckInCheckOutEvent.time",
"baseField": "specimen.events.SpecimenCheckInCheckOutEvent.time"
},
{
"name": "events.SpecimenFrozenEvent.time",
"baseField": "specimen.events.SpecimenFrozenEvent.time"
},
{
"name": "events.SpecimenFrozenEvent.user",
"baseField": "specimen.events.SpecimenFrozenEvent.user"
},
{
"name": "events.SpecimenFrozenEvent.frozenMethod",
"baseField": "specimen.events.SpecimenFrozenEvent.frozenMethod"
}
]
}
],
"showCollectionTree" : false
}
}
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| Screenshot | When user clicks on collect specimens from visit overview, it directly takes to below page. 
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