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Search for DNA/RNA
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Search for DNA/RNA
Example: User wants to search for female participants with lung cancer who have lung tumour specimens with RNA > 5 ug AND DNA > 5 ug . For queries that have child and parent samples, you need to create subqueries. Refer to wiki page for more details.
The example query file can be imported by downloading this file- Query File
Here are the steps how to create a query for this task:
- Select Queries from Dashboard and Click on '+Create.'
- Click on the Participant form and select 'Gender'. Add a filter with Operator 'Equals' and select 'Female' under the Condition Value.
- To add conditions for the anatomic site, click on Specimen and select 'Anatomic Site'. Add a filter with Operator 'Equals' and select 'Lung' as a value.
- To define the type of specimens, click on Specimen and select 'Type'. Add 'Frozen Tissue' under the value.
- To define tissue type, which is cancer in this case, click on Specimen and select 'Pathological Status'. Add a filter with Operator 'Equals' and select 'Malignant`under the condition value.