Property | Description | Possible Values |
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Add Participant on No Match | Allow or disallow users to add new participants when lookup yields no matching participants in two-step registration workflow. | Enabled/ Disabled |
Aliquot Label Format | The system-level format for aliquot labels. | %PSPEC_LABEL%.%PSPEC_UID% |
Coordinator Role | Name of the role that is assigned to coordinators. When specified, coordinators cannot update participants, visits, and specimens if any of the specimens underneath them are in a received state. | |
CP Coding | Enable or disable short codes for collection protocol, events, and specimen requirements. Needed for barcoding. | Enabled/ Disabled |
CP Expiry Reminder | Number of days prior to collection protocol expiry when email notification should be sent to the PI, coordinators, and CP site coordinators. | 30 |
Repeat CP Expiry Reminder | Number of days after which email notification should be repeated for collection protocol expiry. E.g. If the values for CP Expiry reminder and Repeat CP expiry Reminder are set as 30 and 5, it will send 1 email every 5 days for 30 days prior to expiry. In total, it will send 6 notifications. | 5 |
CP SOP Document | System-level collection protocol SOP document | |
SOP Documents Directory | Folder on the server to store collection protocol SOP documents | |
CP SOP Link | System-level collection protocol SOP document link | |
Consent Document Print Template | HTML template to use for printing the consent documents. | |
Specimen Barcoding | Enable or disable barcoding support for Specimen | Enabled/ Disabled |
External Participant Sites | A comma-separated list of site IDs or names from which participant details are sourced from the external databases like EPIC etc | |
Extract Text from SPR PDF Docs | Enable or disable extraction of text content from SPR PDF documents | Enabled/ Disabled |
Image URL | URL pattern to use for rendering the specimen image links. | |
Imaging | Enable to allow users to view the specimen images. | |
Mandatory Aliquot Quantity | Enable to make aliquots quantity a mandatory field. | Enabled: You cannot add, collect, distribute, and return aliquots with blank quantity. Disabled: You can add, collect, distribute, and return aliquots with blank quantity. | Info |
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Please use the record type as “Specimen“ when trying to create aliquot with blank quantities. |
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Max. Child Specimens(new in v10.1) | Maximum number of child specimens that can be created from a parent specimen. | Default value 100 |
Specimens Update UI Limit | Maximum number of specimens that can be updated at a time using UI. The default value is 100. | |
MPI Format | Format for auto-generating master patient index (MPI). | The format should be like: Prefix + unique number + suffix e.g MPI + %05d + ID ==> MPI00001ID |
MPI Custom Generator | Custom Java class to auto-generate master patient index (MPI). | |
MPI RegEx Pattern | RegEx pattern to validate the master patient index (MPI). e.g. The regEx pattern for an 8 digit number should be ^([0-9]{8}) | |
MPI Custom Validator | Custom Java class to validate the master patient index (MPI). | |
Site-based Participant Access | Restrict access to participants based on the user's sites. By default, all participants within a protocol are displayed. | Enabled/ Disabled |
Consent File Directory | Folder on the server to store participant consent files. | |
Participants Lookup Workflow | Spring bean name or fully qualified name of a class implementing customized matching participants lookup workflow. For example: bean: customisedLookup or class: com.krishagni.openspecimen.plugins.CustomisedLookup | |
UID Pattern | The pattern for participant unique identifier (UID) | |
UID Custom Validator | Custom validator for participant Unique ID field. | |
Survey Link Age | Number of days during which a survey link is valid. | |
Pending Specimens Display Interval | Pending specimens will be automatically hidden in specimen tree after specified number of days have elapsed since collection of parent specimen or visit. | 60 If you add the value as '0', the pending specimens would be hidden immediately. |
Shipment Received Quality | Regular expression for acceptable shipment received qualities. | Acceptable|Acceptable - Clotted |
Specimens Sorting by Relationship Limit | Maximum number of specimens that can be sorted based on their relationship | 250 |
Specimen Barcode Format (new in v5.0) | The system-level format for auto-generation of specimen barcodes. | %SYS_UID(n)% |
Gel Image Directory | Folder on the server to store gel image files. | |
Specimen Label Printer Implementor | Name of the Java bean defined in the spring context for the implementor class | defaultSpecimenLabelPrinter |
SPR De-identification | Name of the Spring bean implementing the customized logic of de-identifying surgical pathology reports. | |
SPR Directory | Folder on the server to store surgical pathology report files. | |
Staged Participants Retain Interval | Number of days to retain the details of a participant in the staging table | |
Anonymize Participants | Enable or disable features to anonymize the participant's PHI data. | Enabled/ Disabled |
Path Reports | Enable or disable uploading of surgical pathology reports for a visit. | Enabled/ Disabled |
CP Report | System-level collection protocol report settings. These settings are used when CP specific reporting settings are not specified | cp-report-settings.json |
Specimen centric CP Report | System-level specimen centric collection protocol report settings. These settings are used when CP specific reporting settings are not specified. If this setting is also not specified then settings for regular CP reports is used | classpath:/com/krishagni/catissueplus/core/biospecimen/spmn-cp-report-settings.json |
System Workflows | System-level participants and specimens list view configuration. This configuration is used when CP specific configuration is not specified | |
Two-Step Participant Registration | Enable or disable two-step participant registration workflow | Enabled/ Disabled |
UID Mandatory | Enable participant's unique identifier field is mandatory | Enabled/ Disabled |
Unique Specimen Barcode per CP | Enable or Disable uniqueness of Specimen barcodes at CP level. Enabling this setting ensures Specimen barcodes are unique only within Collection Protocol. Disabling this setting ensures no two specimen barcodes are the same throughout the system. | Enabled/ Disabled |
Unique Specimen Label per CP | Enable or Disable uniqueness of Specimen labels at CP level. Enabling this setting ensures Specimen labels are unique only within Collection Protocol. Disabling this setting ensures no two specimen labels are the same throughout the system. | Enabled/ Disabled |
Unplanned Visit Name Format | The system-level format for the unplanned visit names. | %PPI%_%SYS_UID% |
Visit Label Print Rules | CSV file containing the conditions which decides the data to be printed as labels and which printer to use | |
Visit Label Printer Implementor | Name of the Java bean defined in the spring context for the implementor class | |
Specimens Collection Manifest | HTML template for generating specimens collection manifest at the visit level. | classpath:/com/krishagni/openspecimen/manifest/visit.html |
Visits Lookup Workflow | Spring bean name or fully qualified name of a class implementing customized visits lookup workflow. For example: bean: customisedVisitsLookup or class: com.krishagni.openspecimen.plugins.CustomisedVisitsLookup | bean:stagedVisitsLookup |
Visit Name Format | The system-level format for the planned visit names. | %PPI%_%EVENT_LABEL%_%SYS_UID% |
Zero Out Specimen Quantity | Enable to set the available quantity of specimens to zero when they are disposed. | Enabled |